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Alterations in gut microbiome composition and metabolism are associated with neurodegenerative pathologies, barrier dysfunction, and cognitive decline. We apply a standardized bioinformatics workflows to evaluate shared microbial and predicted metabolic pathway signatures associated with Alzheimer’s Disease, providing potential for future precise and effective microbiome-informed therapeutic strategies.

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Early life is a critical window for the maturation of the gut microbiome, gastrointestinal barrier, immune system, and brain development. The microbiota–gut–brain axis plays an essential role during this period, with diet as a major modulator. We discovered that the metabolism of dietary components by infant-associated microbes such as Bifidobacterium infantis is critical for developing health-impacting nutritive strategies. We explore how this critical interaction affects development and behavior.

Publications

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Both bifidobacterial and lactobacilli species are known GABA, SCFA, and acetylcholine producers, however, these traits are highly strain- and substrate-specific. We find that some species are sensitive to substrates available to produce acetate, lactate, and GABA. We explore how specifically dietary oils affect their metabolism in a way that influence microbiota-gut-brain axis.

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